#    This program is free software: you can redistribute it and/or modify
#    it under the terms of the GNU General Public License as published by
#    the Free Software Foundation, either version 3 of the License, or
#    (at your option) any later version.
#
#    This program is distributed in the hope that it will be useful,
#    but WITHOUT ANY WARRANTY; without even the implied warranty of
#    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
#    GNU General Public License for more details.
#
#    You should have received a copy of the GNU General Public License
#    along with this program.  If not, see <http://www.gnu.org/licenses/>.
#
#    Code base of Animesh Sharma [ sharma.animesh@gmail.com ]

#!/usr/bin/perl
open FILE1,"yeast.seq" || die;
while ($line = <FILE1>) {
        chomp ($line);
        if ($line =~ /^>/){
            $line =~ s/>//;
            push(@seqname,$line);
             $cc++;
            if ($seq ne ""){
              #push(@seq,$seq);
	      @l2=&nucl($seq);
		print @l2;
	      $seq = "";
            }
      } else {
                  #$seq=$seq.$line;
      }
}
push(@seq,$seq);
$l1=@seqname;
#for($c1=0;$c1<$l1;$c1++){#print "@seqname[$c1]\n";}
sub nucl {
@seqsplit=split(//,$_);
return @seqsplit;
}
